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Soyomics: A Deeply Integrated Database on Soybean Multi-Omics
Yucheng Liu, Yang Zhang, Xiaonan Liu, Yanting Shen, Dongmei Tian, Xiaoyue Yang, Shulin Liu, Lingbin Ni, Zhang Zhang, Shuhui Song, Zhixi Tian
Molecular Plant
Abstract
As one of the most important crops to supply majority plant oil and protein for the whole world, soybean is facing an increasing global demand. Up to now, vast multi-omics data of soybean were generated, thereby providing valuable resources for functional study and molecular breeding. Nevertheless, it is tremendously challenging for researchers to deal with these big multi-omics data, particularly considering the unprecedented rate of data growth. Therefore, we collect the reported high-quality omics, including assembly genomes, graph pan-genome, resequencing and phenotypic data of representative germplasms, transcriptomic and epigenomic data from different tissues, organs and accessions, and construct an integrated soybean multi-omics database, named SoyOmics (https://ngdc.cncb.ac.cn/soyomics). By equipping with multiple analysis modules and toolkits, SoyOmics is of great utility to facilitate the global scientific community to fully use these big omics datasets for a wide range of soybean studies from fundamental functional investigation to molecular breeding.
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论文编号: |
DOI:10.1016/j.molp.2023.03.011 |
论文题目: |
Soyomics: A Deeply Integrated Database on Soybean Multi-Omics |
英文论文题目: |
Soyomics: A Deeply Integrated Database on Soybean Multi-Omics |
第一作者: |
Yucheng Liu, Yang Zhang, Xiaonan Liu, Yanting Shen, Dongmei Tian, Xiaoyue Yang, Shulin Liu, Lingbin Ni, Zhang Zhang, Shuhui Song, Zhixi Tian |
英文第一作者: |
Yucheng Liu, Yang Zhang, Xiaonan Liu, Yanting Shen, Dongmei Tian, Xiaoyue Yang, Shulin Liu, Lingbin Ni, Zhang Zhang, Shuhui Song, Zhixi Tian |
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2023-03-28 |
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As one of the most important crops to supply majority plant oil and protein for the whole world, soybean is facing an increasing global demand. Up to now, vast multi-omics data of soybean were generated, thereby providing valuable resources for functional study and molecular breeding. Nevertheless, it is tremendously challenging for researchers to deal with these big multi-omics data, particularly considering the unprecedented rate of data growth. Therefore, we collect the reported high-quality omics, including assembly genomes, graph pan-genome, resequencing and phenotypic data of representative germplasms, transcriptomic and epigenomic data from different tissues, organs and accessions, and construct an integrated soybean multi-omics database, named SoyOmics (https://ngdc.cncb.ac.cn/soyomics). By equipping with multiple analysis modules and toolkits, SoyOmics is of great utility to facilitate the global scientific community to fully use these big omics datasets for a wide range of soybean studies from fundamental functional investigation to molecular breeding. |
英文摘要: |
As one of the most important crops to supply majority plant oil and protein for the whole world, soybean is facing an increasing global demand. Up to now, vast multi-omics data of soybean were generated, thereby providing valuable resources for functional study and molecular breeding. Nevertheless, it is tremendously challenging for researchers to deal with these big multi-omics data, particularly considering the unprecedented rate of data growth. Therefore, we collect the reported high-quality omics, including assembly genomes, graph pan-genome, resequencing and phenotypic data of representative germplasms, transcriptomic and epigenomic data from different tissues, organs and accessions, and construct an integrated soybean multi-omics database, named SoyOmics (https://ngdc.cncb.ac.cn/soyomics). By equipping with multiple analysis modules and toolkits, SoyOmics is of great utility to facilitate the global scientific community to fully use these big omics datasets for a wide range of soybean studies from fundamental functional investigation to molecular breeding. |
刊物名称: |
Molecular Plant |
英文刊物名称: |
Molecular Plant |
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