代表性论文（*Corresponding author; #equal contribution）：
First author papers
1. Sun, Qingtao#; Li, Xiangning#; Ren, Miao; Zhao, Mengting; Zhong, Qiuyuan; Ren, Yuqi; Luo, Pan; Ni, Hong; Zhang, Xiaoyu; Zhang, Chen; Yuan Jing; Li Anan; Luo Minmin; Gong Hui; Luo Qingming*; A whole-brain map of long-range inputs to GABAergic interneurons in the mouse medial prefrontal cortex. Nature neuroscience, 22, 8, 1357-1370, 2019.
2. Sun, Qingtao#*; Liu, Mingzhe#; Guan, Wuqiang; Xiao, Xiong; Dong, Chunyang; Bruchas, Michael; Zweifel, Larry; Li, Yulong; Tian, Lin; Li, Bo; Dynorphin modulates motivation through a pallido-amygdala cholinergic circuit. Neuron, 113, 11, 1823 - 1840.e8, 2025.
3. Sun, Qingtao#; Zhang, Jianping#; Li, Anan; Yao, Mei; Liu, Guangcai; Chen, Siqi; Luo, Yue; Wang, Zhi; Gong, Hui; Li, Xiangning*; Luo Qingming*; Acetylcholine deficiency disrupts extratelencephalic projection neurons in the prefrontal cortex in a mouse model of Alzheimer’s disease. Nature Communications, 13, 1, 998, 2022
4. Sun, Qingtao#; van de Lisdonk, Daniëlle#; Ferrer, Miriam#; Gegenhuber, Bruno; Wu, Melody; Park, Youngkyu; Tuveson, David; Tollkuhn, Jessica; Janowitz, Tobias; Li, Bo*; Area postrema neurons mediate interleukin-6 function in cancer cachexia. Nature Communications, 15, 4628, 2024.
5. Sun, Qingtao#; Li, Xiangning#; Li, Anan; Zhang, Jianping; Ding, Zhangheng; Gong, Hui; Luo, Qingming*; Ventral hippocampal-prefrontal interaction affects social behavior via parvalbumin positive neurons in the medial prefrontal cortex. iScience, 23, 3, 100894, 2020
# Co-first author; *Correspondence author
Co-author papers
1. Li, Xiangning; Yu, Bin; Sun, Qingtao; Zhang, Yalun; Ren, Miao; Zhang, Xiaoyan; Li, Anan; Yuan, Jing; Madisen, Linda; Luo, Qingming; Zeng, Hongkui; Gong, Hui; Qiu, Zilong; Generation of a whole-brain atlas for the cholinergic system and mesoscopic projectome analysis of basal forebrain cholinergic neurons. 115, 2, 415-420, 2018, Proceedings of the National Academy of Sciences
2. Zhang, Jianping; Long, Ben; Li, Anan; Sun, Qingtao; Tian, Jiaojiao; Luo, Ting; Ding, Zhangheng; Gong, Hui; Li, Xiangning; Whole-brain three-dimensional profiling reveals brain region specific axon vulnerability in 5xFAD mouse model. Frontiers in Neuroanatomy, 14 608177, 2020
3. Gong, Hui; Xu, Dongli; Yuan, Jing; Li, Xiangning; Guo, Congdi; Peng, Jie; Li, Yuxin; Schwarz, Lindsay A; Li, Anan; Hu, Bihe; Xiong Benyi; Sun Qingtao; Zhang Yalun; Liu Jiepeng; Zhong Qiuyuan; Xu Tonghui; Zeng Shaoqun; Luo Qingming; High-throughput dual-colour precision imaging for brain-wide connectome with cytoarchitectonic landmarks at the cellular level. Nature communications, 7, 1, 12142, 2016
4. Luo, Ting; Deng, Lei; Li, Anan; Zhou, Can; Shao, Shuai; Sun, Qingtao; Gong, Hui; Yang, Xiaoquan; Li, Xiangning; Scalable resin embedding method for large-volume brain tissues with high fluorescence preservation capacity. iScience, 23, 11, 101717, 2020
5. Chen, Xiao; Zhang, Xiaoyu; Zhong, Qiuyuan; Sun, Qingtao; Peng, Jie; Gong, Hui; Yuan, Jing; Dual-mode Micro-Optical Sectioning Tomography for simultaneously acquiring Golgi-stained neuronal morphology with co-located cytoarchitecture in the same brain International Conference on Photonics and Imaging in Biology and Medicine, W3A. 32, 2017, Optica Publishing Group
6. Chen, Xiao; Zhang, Xiaoyu; Zhong, Qiuyuan; Sun, Qingtao; Peng, Jie; Gong, Hui; Yuan, Jing; Simultaneous acquisition of neuronal morphology and cytoarchitecture in the same Golgi-stained brain. Biomedical Optics Express, 9, 1,230-244, 2018
7. Yu, Tingting; Zhu, Jingtan; Li, Yusha; Ma, Yilin; Wang, Jianru; Cheng, Xinran; Jin, Sen; Sun, Qingtao; Li, Xiangning; Gong, Hui; RTF: a rapid and versatile tissue optical clearing method. Scientific reports , 8, 1, 1964, 2018
8. Zhou, Can; Zheng, Ting; Luo, Ting; Yan, Cheng; Sun, Qingtao; Ren, Miao; Zhao, Peilin; Chen, Wu; Ji, Bingqing; Wang, Zhi; Continuous imaging of large-volume tissues with a machinable optical clearing method at subcellular resolution. Biomedical Optics Express, 11, 12 7, 132-7149, 2020
9. Xu, Zhengchao; Feng, Zhao; Zhao, Mengting; Sun, Qingtao; Deng, Lei; Jia, Xueyan; Jiang, Tao; Luo, Pan; Chen, Wu; Tudi, Ayizuohere; Whole-brain connectivity atlas of glutamatergic and GABAergic neurons in the mouse dorsal and median raphe nuclei. Elife, 10 , e65502, 2021, eLife Sciences
10. He, Yong; Gong, Hui; Xiong, Benyi; Xu, Xiaofeng; Li, Anan; Jiang, Tao; Sun, Qingtao; Wang, Simin; Luo, Qingming; Chen, Shangbin; iCut: an integrative cut algorithm enables accurate segmentation of touching cells. Scientific reports, 5, 1, 12089, 2015
11. Li, Yuxin; Gong, Hui; Yang, Xiaoquan; Yuan, Jing; Jiang, Tao; Li, Xiangning; Sun, Qingtao; Zhu, Dan; Wang, Zhenyu; Luo, Qingming; TDat: an efficient platform for processing petabyte-scale whole-brain volumetric images. Frontiers in neural circuits, 11, 51, 2017
12. Zhou, Can; Yang, Xiaoquan; Wu, Shihao; Zhong, Qiuyuan; Luo, Ting; Li, Anan; Liu, Guangcai; Sun, Qingtao; Luo, Pan; Deng, Lei; Ni Hong; Tan Chaozhen; Yuan Jing; Luo Qingming; Hu Xintian; Li Xiangning; Gong Hui; Continuous subcellular resolution three-dimensional imaging on intact macaque brain. Science Bulletin, 67, 1, 85-96, 2022
13. Ren, Miao; Tian, Jiaojiao; Sun, Qingtao; Chen, Siqi; Luo, Ting; Jia, Xueyan; Jiang, Tao; Luo, Qingming; Gong, Hui; Li, Xiangning; Plastic embedding for precise imaging of large-scale biological tissues labeled with multiple fluorescent dyes and proteins. Biomedical Optics Express, 12, 11, 6730-6745, 2021
14. Zhao, Peilin; Wang, Huading; Li, Anan; Sun, Qingtao, Jiang, Tao; Li, Xiangning; Gong, Hui; The mesoscopic connectome of the cholinergic pontomesencephalic tegmentum. Frontiers in Neuroanatomy, 16, 31, 2022
15. Tian, Jiaojiao; Ren, Miao; Zhao, Peilin; Luo, Shukang; Chen, Yingying; Xu, Xiaofeng; Jiang, Tao; Sun, Qingtao; Li, Anan; Gong, Hui; Dissection of the long-range projections of specific neurons at the synaptic level in the whole mouse brain. Proceedings of the National Academy of Sciences of the United States of America , 119, 2022
16. Zhangheng Ding, Jiangjiang Zhao, Tianpeng Luo, Bolin Lu, Xiaoyu Zhang, Siqi Chen, Anan Li, Xueyan Jia, Jianmin Zhang, Wu Chen, Jianwei Chen, Qingtao Sun, Xiangning Li, Hui Gong, Jing Yuan; Multicolor high-resolution whole-brain imaging for acquiring and comparing the brain-wide distributions of type-specific and projection-specific neurons with anatomical annotation in the same brain. Frontiers in Neuroscience, 16 , 1033880, 2022
17. Yao, Mei; Tudi, Ayizuohere; Jiang, Tao; An, Xu; Sun, Qingtao; Li, Anan; Huang, Z Josh; Gong, Hui; Li, Xiangning; Long-range connectome of pyramidal neurons in the sensorimotor cortex. iScience, 26, 4, 2023
18. Dong, Chunyang; Gowrishankar, Raajaram; Jin, Yihan; He, Xinyi; Gupta, Achla; Wang, Huikun; Sayar-Atasoy, Nilufer; Flores, Rodolfo; Mahe, Karan; Tjahjono, Nikki; Liang, Ruqiang; Marley, Aaron; Mizuno Or Grace; Lo, K, Darren; Sun, Qingtao; Whistler, Jennifer; Li, Bo; Gomes, Ivone; Von Zastrow, Mark; Tejeda, Hugo; Atasoy, Deniz; Devi, A, Lakshmi; Bruchas, R, Michael; Banghart, R, Matthew; Tian, Lin. Unlocking opioid neuropeptide dynamics with genetically encoded biosensors. Nature Neuroscience, 27, 1844-1857, 2024.
